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A La Carte
Using the workflow maker, customize your workflow by selecting the right tools
Name
Tools
1
Multiple Alignment
×
MAFFT
Multiple alignment program for amino acid or nucleotide sequences
MAFFT
×
MUSCLE
MUltiple Sequence Comparison by Log- Expectation
MUSCLE
×
Clustal Omega
Multiple sequence alignment software
Clustal Omega
2
Alignment Curation
×
BMGE
cleaning aligned sequences
BMGE
×
Gblocks
cleaning aligned sequences
Gblocks
×
Noisy
Cleaning aligned sequences
Noisy
×
trimAl
trimAl: a tool for automated alignment trimming
trimAl
3
Tree Inference
×
FastME
Distance-based inference of phylogenetic trees
FastME
×
TNT
phylogenetic analysis under parsimony
TNT
×
PhyML+SMS
Maximum likelihood-based inference of phylogenetic trees with Smart Model Selection
PhyML+SMS
×
PhyML
Phylogeny software based on the maximum-likelihood
PhyML
×
FastTree
FastTree : Infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences.
FastTree
×
MrBayes
with options and commands
MrBayes
4
Tree Rendering
×
Newick Display
Display a phylogenetic tree as SVG
Newick Display
Workflow skeleton
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