NGPhylogeny.fr

Desper, Richard and Gascuel, Olivier. Fast and Accurate Phylogeny Reconstruction Algorithms Based on the Minimum-Evolution Principle. Journal of Computational Biology, 9:687–705

Lefort, Vincent and Desper, Richard and Gascuel, Olivier. FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program. Molecular Biology and Evolution, 32:2798–2800

Lemoine, F. and Domelevo Entfellner, J.-B. and Wilkinson, E. and Correia, D. and Dávila Felipe, M. and De Oliveira, T. and Gascuel, O.. Renewing Felsenstein’s phylogenetic bootstrap in the era of big data. Nature, 556:452–456