NGPhylogeny.fr

MUSCLE 3.8.1551_0

Fasta file

Input file in FASTA format

Run options

The number of iterations is predefined to allow to select between accuracy or speed options

Maximum number of iterations (-maxiters)

Increase the quality, increase the computing time

Find diagonals (-diags)

Use diagonal optimization. This can significantly improve speed with closely-related sequences.

Clustering (tree-building) options

Algorithm use to build guide trees for progressive alignment

Output format